Modelled Stucture
Method: Homology modeling
Teplate PDB: 3SKQ_A
Identity: 39.487%
Minimized Score: -545.51
Detail: Structure Info
Detail Information of Inter-species Structural Difference
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0400 Transporter Info | ||||
| Gene Name | SLC55A1 | ||||
| Protein Name | Mitochondrial proton/calcium exchanger protein | ||||
| Gene ID | |||||
| UniProt ID | |||||
| 3D Structure |
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| Inter-species Structural Differences (ISD) | |||||
| Mus musculus (Mouse) | |||||
| Gene Name | Letm1 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 3SKQ_A Sequence Length: 189 Identity: 40% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -529.169 kcal/mol | |||
| Ramachandra Favored |
Excellent |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
Ramz Z Score: -0.03 ± 0.58 Residues in Favored Region: 184 Ramachandran favored: 98.40% Number of Outliers: 2 Ramachandran outliers: 1.07% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.77 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| Rattus norvegicus (Rat) | |||||
| Gene Name | Letm1 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 3SKQ_A Sequence Length: 189 Identity: 40% |
||||
| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -510.93 kcal/mol | |||
| Ramachandra Favored |
Excellent |
||||
| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
Ramz Z Score: -0.24 ± 0.54 Residues in Favored Region: 184 Ramachandran favored: 98.40% Number of Outliers: 2 Ramachandran outliers: 1.07% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.77 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
| Danio rerio (Zebrafish) | |||||
| Gene Name | letm1 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 3SKQ_A Sequence Length: 189 Identity: 41.026% |
||||
| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -525.906 kcal/mol | |||
| Ramachandra Favored |
Excellent |
||||
| QMEANBrane Quality |
Medium |
||||
| Ramachandran Plot |
Ramz Z Score: -0.78 ± 0.51 Residues in Favored Region: 184 Ramachandran favored: 98.40% Number of Outliers: 2 Ramachandran outliers: 1.07% |
||||
| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.77 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
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