Modelled Stucture
Method: Homology modeling
Teplate PDB: 6J8G_A_A
Identity: 99.33%
Minimized Score: -3418.806
Detail: Structure Info
Detail Information of Inter-species Structural Difference
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0529 Transporter Info | ||||
| Gene Name | SCN9A | ||||
| Protein Name | Voltage-gated sodium channel alpha Nav1.7 | ||||
| Gene ID | |||||
| UniProt ID | |||||
| 3D Structure |
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| Inter-species Structural Differences (ISD) | |||||
| Mus musculus (Mouse) | |||||
| Gene Name | Scn9a | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6J8G_A Sequence Length: 1984 Identity: 92.857% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -3346.124 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
Ramz Z Score: -0.82 ± 0.17 Residues in Favored Region: 1900 Ramachandran favored: 95.86% Number of Outliers: 14 Ramachandran outliers: 0.71% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.72 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| Rattus norvegicus (Rat) | |||||
| Gene Name | Scn9a | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6J8G_A Sequence Length: 1984 Identity: 92.656% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -3354.144 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
Ramz Z Score: -0.87 ± 0.18 Residues in Favored Region: 1903 Ramachandran favored: 96.01% Number of Outliers: 27 Ramachandran outliers: 1.36% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.72 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
| Oryctolagus cuniculus (Rabbit) | |||||
| Gene Name | SCN9A | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6J8G_A Sequence Length: 1984 Identity: 93.712% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -3391.624 kcal/mol | |||
| Ramachandra Favored |
Medium |
||||
| QMEANBrane Quality |
Medium |
||||
| Ramachandran Plot |
Ramz Z Score: -0.85 ± 0.17 Residues in Favored Region: 1903 Ramachandran favored: 96.01% Number of Outliers: 18 Ramachandran outliers: 0.91% |
||||
| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.72 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
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