Modelled DT Structure
Method: homology modeling
Template PDB: 5XJY_A
Identity: 50.35%
Minimized Score: -1123.451 kcal/mol
Detail: Structure Info
General Information of DT | |||||
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DT ID | DTD0042 | ||||
Gene Name | ABCA4 | ||||
Protein Name | ATP-binding cassette sub-family A member 4 | ||||
Gene ID | |||||
UniProt ID | |||||
TCDB ID | |||||
3D Structure |
Modelled DT Structure Method: homology modeling Template PDB: 5XJY_A Identity: 50.35% Minimized Score: -1123.451 kcal/mol Detail: Structure Info |
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Synonyms | ABC10; ABCA4; ABCR; ARMD2; CORD3; FFM; RIM ABC transporter; RIM protein; RP19; Retinal-specific ATP-binding cassette transporter; RmP; STGD; STGD1; Stargardt disease protein | ||||
DT Family | ATP-Binding Cassette (ABC) Superfamily | ||||
Cholesterol/Phospholipid/Retinal (CPR) Flippase Family (ABCA) | |||||
Tissue Specificity | Retinal-specific. Seems to be exclusivelyfound in the rims of rod photoreceptor cells. | ||||
Function | This transporter may play a role in photoresponse, removing ATR/NR-PE from the extracellular photoreceptor surfaces during bleach recovery. In the visual cycle, acts as an inward-directed retinoid flipase, retinoid substrates imported by ABCA4 from the extracellular or intradiscal (rod) membrane surfaces to the cytoplasmic membrane surface are all-trans-retinaldehyde (ATR) and N-retinyl-phosphatidyl-ethanolamine (NR-PE). Once transported to the cytoplasmic surface, ATR is reduced to vitamin A by trans-retinol dehydrogenase (tRDH) and then transferred to the retinal pigment epithelium (RPE) where it is converted to 11-cis-retinal. | ||||
Endogenous Substrate(s) | N-retinylidene-phosphatidylethanolamine; Retinal | ||||
Variability Data of This Drug Transporter (DT) | |||||
Regulatory Variability Data of This DT (VARIDT 3.0) |
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(β) Post-translational Modification of This DT |
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(γ) Transcriptional Regulation of This DT |
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(δ) Epigenetic Regulation of This DT |
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(ε) Exogenous Modulation of This DT |
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Structural Variability Data of This DT (VARIDT 2.0) |
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(β) Inter-species Structural Differences |
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(γ) Outward/inward-facing Conformation |
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General Variability Data of This DT (VARIDT 1.0) |
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(β) Disease-specific Protein Abundances of This DT |
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(γ) Species- and Tissue-specific DT Abundances |
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