Detail Information of Transcriptional Regulations

General Information of Drug Transporter (DT)
DT ID DTD0243 Transporter Info
Gene Name SLC27A6
Transporter Name Long-chain fatty acid transport protein 6
Gene ID
28965
UniProt ID
Q9Y2P4

Transcriptional Regulation of This DT (TSR)

TF Superclass 1: Basic domains

      Class 1.1: Basic leucine zipper factors

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        CEBPB 

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       Transcriptional Phenomenon 1

 Direct binding to SLC27A6 gene [1]

TF Protein Name

 CCAAT/enhancer-binding protein beta Transcription Factor Info

Tissue

 Blood

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 CCAAT/enhancer-binding protein beta (CEBPB) can directly bind to the SLC27A6 gene, which in turn affects the expression or function of the drug transporter Long-chain fatty acid transport protein 6.

      Class 1.2: Basic helix-loop-helix factors

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        SREBF1 

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       Transcriptional Phenomenon 1

 Activation of SLC27A6 gene in health condition [2]

TF Protein Name

 Sterol regulatory element-binding protein 1 Transcription Factor Info

Studied Phenotype

 Heallth [ICD11: N.A]

Tissue

 Breast

Related DT Changes

 Up regulating

Experimental Material

 goat mammary epithelial cell isolates

Detailed Description

 Sterol regulatory element-binding protein 1 (SREBF1) has been reported to activate the transcription of SLC27A6 gene in health condition, which leads to an increased expression of the drug transporter Long-chain fatty acid transport protein 6.

TF Superclass 2: Zinc-coordinating DNA-binding domains

      Class 2.3: C2H2 zinc finger factors

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        MAZ 

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       Transcriptional Phenomenon 1

 Direct binding to SLC27A6 gene [3]

TF Protein Name

 Myc-associated zinc finger protein Transcription Factor Info

Tissue

 Blood; Bone marrow; Cervix; Lung

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Myc-associated zinc finger protein (MAZ) can directly bind to the SLC27A6 gene, which in turn affects the expression or function of the drug transporter Long-chain fatty acid transport protein 6.

TF Superclass 3: Helix-turn-helix domains

      Class 3.5: Tryptophan cluster factors

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        ERG 

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       Transcriptional Phenomenon 1

 Direct binding to SLC27A6 gene [4]

TF Protein Name

 Transcriptional regulator ERG Transcription Factor Info

Tissue

 Aorta

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Transcriptional regulator ERG (ERG) can directly bind to the SLC27A6 gene, which in turn affects the expression or function of the drug transporter Long-chain fatty acid transport protein 6.

        FLI1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC27A6 gene [5]

TF Protein Name

 Friend leukemia integration 1 transcription factor Transcription Factor Info

Tissue

 Blood; Mesenchymal; Vein

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Friend leukemia integration 1 transcription factor (FLI1) can directly bind to the SLC27A6 gene, which in turn affects the expression or function of the drug transporter Long-chain fatty acid transport protein 6.
References
1 hTFtarget: A Comprehensive Database for Regulations of Human Transcription Factors and Their Targets. Genomics Proteomics Bioinformatics. 2020 Apr;18(2):120-221. (ID:ENSG00000113396)
2 Rapid communication: lipid metabolic gene expression and triacylglycerol accumulation in goat mammary epithelial cells are decreased by inhibition of SREBP-1. J Anim Sci. 2018 Jun 4;96(6):2399-2407.
3 The Encyclopedia of DNA elements (ENCODE): data portal update. Nucleic Acids Res. 2018 Jan 4;46(D1):D794-D801
4 NCBI GEO: archive for functional genomics data sets--update. Nucleic Acids Res. 2013 Jan;41(D1):D991-5.
5 Closure of the NCBI SRA and implications for the long-term future of genomics data storage. Genome Biol. 2011;12(3):402.

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