General Information of This Microbe species
Species ID
MIC00028
Species Name
Escherichia coli
Taxonomy ID
562
Lineage
Kingdom: Bacteria
Phylum: Pseudomonadota
Class: Gammaproteobacteria
Order: Enterobacterales
Family: Enterobacteriaceae
Genus: Escherichia
Species: Escherichia coli
Drug Transporter(s) Regulated by This Microbe species

Class1: Microbiota direct bioaccumulation of drugs

ATP7A

Transporter Info

Health [ICD11: N.A]

[1] , [2] , [3] , [4]

ATP7B

Transporter Info

Health [ICD11: N.A]

[1] , [2] , [3] , [4]

CACNA1A

Transporter Info

Health [ICD11: N.A]

[5] , [6]

CNT1

Transporter Info

Health [ICD11: N.A]

[7]

CNT2

Transporter Info

Health [ICD11: N.A]

[7]

CNT3

Transporter Info

Health [ICD11: N.A]

[7]

COPT2

Transporter Info

Health [ICD11: N.A]

[1] , [2] , [4] , [8]

CTR1

Transporter Info

Health [ICD11: N.A]

[1] , [2] , [4] , [8]

FLVCR1

Transporter Info

Health [ICD11: N.A]

[9] , [10] , [11] , [12]

IREG1

Transporter Info

Health [ICD11: N.A]

[5] , [6]

MRP4

Transporter Info

Health [ICD11: N.A]

[13]

NRAMP2

Transporter Info

Health [ICD11: N.A]

[6] , [14] , [15] , [16]

OAT2

Transporter Info

Health [ICD11: N.A]

[13]

OAT3

Transporter Info

Health [ICD11: N.A]

[13]

OAT4

Transporter Info

Health [ICD11: N.A]

[13]

OATP1A2

Transporter Info

Health [ICD11: N.A]

[13]

PEPT1

Transporter Info

Health [ICD11: N.A]

[17]

PEPT2

Transporter Info

Health [ICD11: N.A]

[18]

SLC11A1

Transporter Info

Health [ICD11: N.A]

[19] , [20] , [21] , [22] , [23]

SLC25A28

Transporter Info

Health [ICD11: N.A]

[24] , [25] , [16] , [6]

SLC25A37

Transporter Info

Health [ICD11: N.A]

[5] , [6]

SLC41A1

Transporter Info

Health [ICD11: N.A]

[26] , [27] , [28]

SLC48A1

Transporter Info

Health [ICD11: N.A]

[9] , [10] , [11] , [12]

SLC49A2

Transporter Info

Health [ICD11: N.A]

[9] , [10] , [11] , [12]

SLC58A1

Transporter Info

Health [ICD11: N.A]

[26] , [27] , [28]

ZIP1

Transporter Info

Health [ICD11: N.A]

[29] , [30] , [31]

ZIP11

Transporter Info

Health [ICD11: N.A]

[29] , [30] , [31]

ZIP12

Transporter Info

Health [ICD11: N.A]

[29] , [30] , [31]

ZIP13

Transporter Info

Health [ICD11: N.A]

[29] , [30] , [31]

ZIP2

Transporter Info

Health [ICD11: N.A]

[29] , [30] , [31]

ZIP3

Transporter Info

Health [ICD11: N.A]

[29] , [30] , [31]

ZIP4

Transporter Info

Health [ICD11: N.A]

[29] , [30] , [31]

ZIP5

Transporter Info

Health [ICD11: N.A]

[29] , [30] , [31]

ZIP7

Transporter Info

Health [ICD11: N.A]

[29] , [30] , [31]

ZIP8

Transporter Info

Health [ICD11: N.A]

[5] , [6]

ZIP9

Transporter Info

Health [ICD11: N.A]

[29] , [30] , [31]

ZNT1

Transporter Info

Health [ICD11: N.A]

[29] , [32] , [33] , [31]

ZNT10

Transporter Info

Health [ICD11: N.A]

[29] , [32] , [33] , [31]

ZNT2

Transporter Info

Health [ICD11: N.A]

[29] , [32] , [33] , [31]

ZNT3

Transporter Info

Health [ICD11: N.A]

[29] , [32] , [33] , [31]

ZNT4

Transporter Info

Health [ICD11: N.A]

[29] , [32] , [33] , [31]

ZNT5

Transporter Info

Health [ICD11: N.A]

[29] , [32] , [33] , [31]

ZNT6

Transporter Info

Health [ICD11: N.A]

[29] , [32] , [33] , [31]

ZNT7

Transporter Info

Health [ICD11: N.A]

[29] , [32] , [33] , [31]

ZNT8

Transporter Info

Health [ICD11: N.A]

[29] , [34] , [31]

ZNT9

Transporter Info

Health [ICD11: N.A]

[29] , [32] , [33] , [31]

Class3: Microbiota regulating the expression and function of DT via the biotransformation of exogenous substances

ABCC7

Transporter Info

Mastitis [ICD11: GB21]

[35]

ASCT1

Transporter Info

Mastitis [ICD11: GB21]

[35]

DAT1

Transporter Info

Watery diarrhea [ICD11: ME05.1]

[36] , [37] , [38]

GLUT1

Transporter Info

Mastitis [ICD11: GB21]

[35]

SGLT1

Transporter Info

Watery diarrhea [ICD11: ME05.1]

[36] , [39] , [40]

SLC27A3

Transporter Info

Mastitis [ICD11: GB21]

[35]

ZIP10

Transporter Info

Health [ICD11: N.A]

[41]

ZIP14

Transporter Info

Health [ICD11: N.A]

[31] , [42]

ZIP6

Transporter Info

Health [ICD11: N.A]

[31] , [42]

Class4: Microbiota regulating the expression and function of DT via other mechanisms

BCRP

Transporter Info

Colon cancer [ICD11: 2B90]

[43]

MRP2

Transporter Info

Colon cancer [ICD11: 2B90]

[43]

NKCC1

Transporter Info

Diarrhea associated with infection by invasive enteric pathogens [ICD11: 1A03]

[36] , [44]

OAT1

Transporter Info

Colon cancer [ICD11: 2B90]

[43]

OATP2B1

Transporter Info

Health [ICD11: N.A]

[45] , [46]

P-GP

Transporter Info

Colon cancer [ICD11: 2B90]

[43]

SLC9A2

Transporter Info

Diarrhea associated with infection by enteropathogenic Escherichia coli [ICD11: 1A03]

[36] , [47]

SLC9A3

Transporter Info

Diarrhea associated with infection by enteropathogenic Escherichia coli [ICD11: 1A03]

[36] , [47]
Species Relative Abundances of This Microbe species
References
1 Trace metals and animal health: Interplay of the gut microbiota with iron, manganese, zinc, and copper. Anim Nutr. 2021 Sep;7(3):750-761.
2 Cu Homeostasis in Bacteria: The Ins and Outs. Membranes (Basel). 2020 Sep 18;10(9):242.
3 One gene, two proteins: coordinated production of a copper chaperone by differential transcript formation and translational frameshifting in Escherichia coli. Mol Microbiol. 2017 Nov;106(4):635-645.
4 Human copper transporters: mechanism, role in human diseases and therapeutic potential. Future Med Chem. 2009 Sep;1(6):1125-42.
5 The pathogen-associated iroA gene cluster mediates bacterial evasion of lipocalin 2. Proc Natl Acad Sci U S A. 2006 Oct 31;103(44):16502-7.
6 Iron and manganese transport in mammalian systems. Biochim Biophys Acta Mol Cell Res. 2021 Jan;1868(1):118890.
7 Transport of physiological nucleosides and anti-viral and anti-neoplastic nucleoside drugs by recombinant Escherichia coli nucleoside-H(+) cotransporter (NupC) produced in Xenopus laevis oocytes. Mol Membr Biol. 2004 Jan-Feb;21(1):1-10.
8 Copper import in Escherichia coli by the yersiniabactin metallophore system. Nat Chem Biol. 2017 Sep;13(9):1016-1021.
9 Sequestration and scavenging of iron in infection. Infect Immun. 2013 Oct;81(10):3503-14.
10 Haem iron-transport system in enterohaemorrhagic Escherichia coli O157:H7. Mol Microbiol. 1997 Feb;23(4):825-33.
11 Heme Mobilization in Animals: A Metallolipid's Journey. Acc Chem Res. 2016 Jun 21;49(6):1104-10.
12 Handling heme: The mechanisms underlying the movement of heme within and between cells. Free Radic Biol Med. 2019 Mar;133:88-100.
13 Predictive compound accumulation rules yield a broad-spectrum antibiotic. Nature. 2017 May 18;545(7654):299-304.
14 Iron metabolism in pathogenic bacteria. Annu Rev Microbiol. 2000;54:881-941.
15 Relative availability of transferrin-bound iron and cell-derived iron to aerobactin-producing and enterochelin-producing strains of Escherichia coli and to other microorganisms. Infect Immun. 1991 Sep;59(9):3185-90.
16 Iron, copper, zinc, and manganese transport and regulation in pathogenic Enterobacteria: correlations between strains, site of infection and the relative importance of the different metal transport systems for virulence. Front Cell Infect Microbiol. 2013 Dec 5;3:90.
17 DtpB (YhiP) and DtpA (TppB, YdgR) are prototypical proton-dependent peptide transporters of Escherichia coli. FEBS J. 2008 Jul;275(13):3290-8.
18 Projection structure of DtpD (YbgH), a prokaryotic member of the peptide transporter family. J Mol Biol. 2009 Dec 11;394(4):708-17.
19 Manganese homeostasis and utilization in pathogenic bacteria. Mol Microbiol. 2015 Jul;97(2):216-28.
20 The NRAMP proteins of Salmonella typhimurium and Escherichia coli are selective manganese transporters involved in the response to reactive oxygen. Mol Microbiol. 2000 Jun;36(5):1085-100.
21 Identification of the Escherichia coli K-12 Nramp orthologue (MntH) as a selective divalent metal ion transporter. Mol Microbiol. 2000 Mar;35(5):1065-78.
22 Human iron transporters. Genes Nutr. 2011 Feb;6(1):45-54.
23 Iron transport machinery of human cells: players and their interactions. Curr Top Membr. 2012;69:67-93.
24 Bacterial ferrous iron transport: the Feo system. FEMS Microbiol Rev. 2016 Mar;40(2):273-98.
25 A new ferrous iron-uptake transporter, EfeU (YcdN), from Escherichia coli. Mol Microbiol. 2006 Oct;62(1):120-31.
26 The magnesium transporter A is activated by cardiolipin and is highly sensitive to free magnesium in vitro. Elife. 2016 Jan 18;5:e11407.
27 The SLC41 family of MgtE-like magnesium transporters. Mol Aspects Med. 2013 Apr-Jun;34(2-3):620-8.
28 The bacterial magnesium transporter CorA can functionally substitute for its putative homologue Mrs2p in the yeast inner mitochondrial membrane. J Biol Chem. 1999 Jul 16;274(29):20438-43.
29 Transition metal ions at the crossroads of mucosal immunity and microbial pathogenesis. Front Cell Infect Microbiol. 2014 Jan 24;4:2.
30 The ZnuABC high-affinity zinc uptake system and its regulator Zur in Escherichia coli. Mol Microbiol. 1998 Jun;28(6):1199-210.
31 Transition metals and host-microbe interactions in the inflamed intestine. Biometals. 2019 Jun;32(3):369-384.
32 Histidine pairing at the metal transport site of mammalian ZnT transporters controls Zn2+ over Cd2+ selectivity. Proc Natl Acad Sci U S A. 2012 May 8;109(19):7202-7.
33 Selective metal binding to a membrane-embedded aspartate in the Escherichia coli metal transporter YiiP (FieF). J Biol Chem. 2005 Oct 7;280(40):33716-24.
34 ZupT is a Zn(II) uptake system in Escherichia coli. J Bacteriol. 2002 Feb;184(3):864-6.
35 Underlying mechanisms involved in the decrease of milk secretion during Escherichia coli endotoxin induced mastitis in lactating mice. Vet Res. 2013 Dec 5;44(1):119.
36 The Role of Ion Transporters in the Pathophysiology of Infectious Diarrhea. Cell Mol Gastroenterol Hepatol. 2018 Mar 5;6(1):33-45.
37 Enteric infection meets intestinal function: how bacterial pathogens cause diarrhoea. Nat Rev Microbiol. 2009 Feb;7(2):110-9.
38 Mechanism underlying inhibition of intestinal apical Cl/OH exchange following infection with enteropathogenic E. coli. J Clin Invest. 2007 Feb;117(2):428-37.
39 Infectious diarrhea: Cellular and molecular mechanisms. Gut Microbes. 2010 Jan;1(1):4-21.
40 Potent diarrheagenic mechanism mediated by the cooperative action of three enteropathogenic Escherichia coli-injected effector proteins. Proc Natl Acad Sci U S A. 2006 Feb 7;103(6):1876-81.
41 Metal transporter Slc39a10 regulates susceptibility to inflammatory stimuli by controlling macrophage survival. Proc Natl Acad Sci U S A. 2017 Dec 5;114(49):12940-12945.
42 Interleukin-6 regulates the zinc transporter Zip14 in liver and contributes to the hypozincemia of the acute-phase response. Proc Natl Acad Sci U S A. 2005 May 10;102(19):6843-8.
43 Causative Role of Anoxic Environment in Bacterial Regulation of Human Intestinal Function. Cell Mol Bioeng. 2022 Sep 16;15(5):493-504.
44 Enteroinvasive bacteria alter barrier and transport properties of human intestinal epithelium: role of iNOS and COX-2. Gastroenterology. 2002 Apr;122(4):1070-87.
45 The influence of the gut microbiota on the bioavailability of oral drugs. Acta Pharm Sin B. 2021 Jul;11(7):1789-1812.
46 Administration of a probiotic can change drug pharmacokinetics: effect of E. coli Nissle 1917 on amidarone absorption in rats. PLoS One. 2014 Feb 5;9(2):e87150.
47 Differential regulation of Na+/H+ exchange isoform activities by enteropathogenic E. coli in human intestinal epithelial cells. Am J Physiol Gastrointest Liver Physiol. 2004 Aug;287(2):G370-8.

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