Detail Information of Transcriptional Regulations

General Information of Drug Transporter (DT)
DT ID DTD0477 Transporter Info
Gene Name SLC8A1
Transporter Name Sodium/calcium exchanger 1
Gene ID
6546
UniProt ID
P32418

Transcriptional Regulation of This DT (TSR)

TF Superclass 1: Basic domains

      Class 1.1: Basic leucine zipper factors

Click to Show/Hide the Full List of 3 TF(s) Regulating This DT

        ATF3 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC8A1 gene [1]

TF Protein Name

 Cyclic AMP-dependent transcription factor ATF-3 Transcription Factor Info

Tissue

 Colon

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Cyclic AMP-dependent transcription factor ATF-3 (ATF3) can directly bind to the SLC8A1 gene, which in turn affects the expression or function of the drug transporter Sodium/calcium exchanger 1.

        CEBPA 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC8A1 gene [2]

TF Protein Name

 CCAAT/enhancer-binding protein alpha Transcription Factor Info

Tissue

 Embryo

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 CCAAT/enhancer-binding protein alpha (CEBPA) can directly bind to the SLC8A1 gene, which in turn affects the expression or function of the drug transporter Sodium/calcium exchanger 1.

        CEBPB 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC8A1 gene [3]

TF Protein Name

 CCAAT/enhancer-binding protein beta Transcription Factor Info

Tissue

 Bone

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 CCAAT/enhancer-binding protein beta (CEBPB) can directly bind to the SLC8A1 gene, which in turn affects the expression or function of the drug transporter Sodium/calcium exchanger 1.

      Class 1.2: Basic helix-loop-helix factors

Click to Show/Hide the Full List of 2 TF(s) Regulating This DT

        ARNT 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC8A1 gene [4]

TF Protein Name

 Aryl hydrocarbon receptor nuclear translocator Transcription Factor Info

Tissue

 Breast

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Aryl hydrocarbon receptor nuclear translocator (ARNT) can directly bind to the SLC8A1 gene, which in turn affects the expression or function of the drug transporter Sodium/calcium exchanger 1.

        TCF21 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC8A1 gene [4]

TF Protein Name

 Transcription factor 21 Transcription Factor Info

Tissue

 Coronary artery

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Transcription factor 21 (TCF21) can directly bind to the SLC8A1 gene, which in turn affects the expression or function of the drug transporter Sodium/calcium exchanger 1.

TF Superclass 2: Zinc-coordinating DNA-binding domains

      Class 2.1: Nuclear receptors with C4 zinc fingers

Click to Show/Hide the Full List of 2 TF(s) Regulating This DT

        PGR 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC8A1 gene [4]

TF Protein Name

 Progesterone receptor Transcription Factor Info

Tissue

 Breast; Cervix

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Progesterone receptor (PGR) can directly bind to the SLC8A1 gene, which in turn affects the expression or function of the drug transporter Sodium/calcium exchanger 1.

        PPARG 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC8A1 gene [3]

TF Protein Name

 Peroxisome proliferator-activated receptor gamma Transcription Factor Info

Tissue

 Embryo

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Peroxisome proliferator-activated receptor gamma (PPARG) can directly bind to the SLC8A1 gene, which in turn affects the expression or function of the drug transporter Sodium/calcium exchanger 1.

      Class 2.2: Other C4 zinc finger-type factors

Click to Show/Hide the Full List of 2 TF(s) Regulating This DT

        GATA3 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC8A1 gene [1]

TF Protein Name

 Trans-acting T-cell-specific transcription factor GATA-3 Transcription Factor Info

Tissue

 Blood

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Trans-acting T-cell-specific transcription factor GATA-3 (GATA3) can directly bind to the SLC8A1 gene, which in turn affects the expression or function of the drug transporter Sodium/calcium exchanger 1.

        GATA4 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Activation of SLC8A1 gene in cardiac hypertrophy condition [5]

TF Protein Name

 Transcription factor GATA-4 Transcription Factor Info

Studied Phenotype

 Cardiac hypertrophy [ICD11: BC45]

Tissue

 Cardiac Muscle

Related DT Changes

 Up regulating

Experimental Material

 Rat primary cardiocyte isolates

Detailed Description

 Transcription factor GATA-4 (GATA4) has been reported to activate the transcription of SLC8A1 gene in cardiac hypertrophy condition, which leads to an increased expression of the drug transporter Sodium/calcium exchanger 1.

      Class 2.3: C2H2 zinc finger factors

Click to Show/Hide the Full List of 3 TF(s) Regulating This DT

        EGR1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Repression of SLC8A1 gene in heart failure condition [6]

TF Protein Name

 Early growth response protein 1 Transcription Factor Info

Affected Drug/Substrate

 Calcium

Studied Phenotype

 Heart failure [ICD11: BD10-BD1Z]

Tissue

 Heart

Related DT Changes

 Down regulating

Experimental Material

 C57BL/6 mice

Detailed Description

 Early growth response protein 1 (EGR1) has been reported to repress the transcription of SLC8A1 gene in heart failure condition, which leads to a decreased expression of the drug transporter Sodium/calcium exchanger 1.

        MAZ 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC8A1 gene [2]

TF Protein Name

 Myc-associated zinc finger protein Transcription Factor Info

Tissue

 Lung

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Myc-associated zinc finger protein (MAZ) can directly bind to the SLC8A1 gene, which in turn affects the expression or function of the drug transporter Sodium/calcium exchanger 1.

        ZNF263 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC8A1 gene [1]

TF Protein Name

 Zinc finger protein 263 Transcription Factor Info

Tissue

 Kidney

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Zinc finger protein 263 (ZNF263) can directly bind to the SLC8A1 gene, which in turn affects the expression or function of the drug transporter Sodium/calcium exchanger 1.

TF Superclass 3: Helix-turn-helix domains

      Class 3.5: Tryptophan cluster factors

Click to Show/Hide the Full List of 2 TF(s) Regulating This DT

        ETS1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC8A1 gene [2]

TF Protein Name

 Protein C-ets-1 Transcription Factor Info

Tissue

 Blood; Bone; Bone marrow; Kidney; Vein

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Protein C-ets-1 (ETS1) can directly bind to the SLC8A1 gene, which in turn affects the expression or function of the drug transporter Sodium/calcium exchanger 1.

        FLI1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC8A1 gene [3]

TF Protein Name

 Friend leukemia integration 1 transcription factor Transcription Factor Info

Tissue

 Blood; Vein

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Friend leukemia integration 1 transcription factor (FLI1) can directly bind to the SLC8A1 gene, which in turn affects the expression or function of the drug transporter Sodium/calcium exchanger 1.

TF Superclass 5: alpha-Helices exposed by beta-structures

      Class 5.1: MADS box factors

Click to Show/Hide the Full List of 1 TF(s) Regulating This DT

        SRF 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Activation of SLC8A1 gene in cardiac hypertrophy condition [5]

TF Protein Name

 Serum response factor Transcription Factor Info

Studied Phenotype

 Cardiac hypertrophy [ICD11: BC45]

Tissue

 Cardiac Muscle

Related DT Changes

 Up regulating

Experimental Material

 Rat primary cardiocyte isolates

Detailed Description

 Serum response factor (SRF) has been reported to activate the transcription of SLC8A1 gene in cardiac hypertrophy condition, which leads to an increased expression of the drug transporter Sodium/calcium exchanger 1.

TF Superclass 6: Immunoglobulin fold

      Class 6.2: STAT domain factors

Click to Show/Hide the Full List of 1 TF(s) Regulating This DT

        STAT1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC8A1 gene [4]

TF Protein Name

 Signal transducer and activator of transcription 1-alpha/beta Transcription Factor Info

Tissue

 Blood; Cervix

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Signal transducer and activator of transcription 1-alpha/beta (STAT1) can directly bind to the SLC8A1 gene, which in turn affects the expression or function of the drug transporter Sodium/calcium exchanger 1.

TF Superclass 7: beta-Hairpin exposed by an alpha/beta-scaffold

      Class 7.1: SMAD/NF-1 DNA-binding domain factors

Click to Show/Hide the Full List of 1 TF(s) Regulating This DT

        NFIC 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC8A1 gene [1]

TF Protein Name

 Nuclear factor 1 C-type Transcription Factor Info

Tissue

 Brain

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Nuclear factor 1 C-type (NFIC) can directly bind to the SLC8A1 gene, which in turn affects the expression or function of the drug transporter Sodium/calcium exchanger 1.
References
1 NCBI GEO: archive for functional genomics data sets--update. Nucleic Acids Res. 2013 Jan;41(D1):D991-5.
2 Closure of the NCBI SRA and implications for the long-term future of genomics data storage. Genome Biol. 2011;12(3):402.
3 The Encyclopedia of DNA elements (ENCODE): data portal update. Nucleic Acids Res. 2018 Jan 4;46(D1):D794-D801
4 hTFtarget: A Comprehensive Database for Regulations of Human Transcription Factors and Their Targets. Genomics Proteomics Bioinformatics. 2020 Apr;18(2):120-425. (ID:ENSG00000183023)
5 The role of GATA, CArG, E-box, and a novel element in the regulation of cardiac expression of the Na+-Ca2+ exchanger gene. J Biol Chem. 1999 Apr 30;274(18):12819-26.
6 Egr-1 negatively regulates expression of the sodium-calcium exchanger-1 in cardiomyocytes in vitro and in vivo. Cardiovasc Res. 2005 Jan 1;65(1):187-94.

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